東北林業大學生命科學學院教授、博士生導師。
基本介紹
- 中文名：孫善文
- 國籍：中國
- 畢業院校：東北師範大學、中國科學院西雙版納熱帶植物園、拜羅伊特大學
- 學位/學歷：博士
教育經歷,工作經歷,研究領域,科研項目,學術兼職,發明專利,論文發表,
教育經歷
2014-10至2019-04，德國拜羅伊特大學，博士，導師：Bettina Engelbrecht
2010-09至2014-07，中國科學院西雙版納熱帶植物園，碩士，導師：曹坤芳研究員
2006-09至2010-07，東北師範大學，城市與環境科學學院，學士
工作經歷
2019-09至2021-04，電子科技大學，博士後，導師：鄒權教授
2021-05至今 東北林業大學，教授，博士生導師
研究領域
生物序列分析，基因組學，人工智慧
科研項目
主持國家自然基金委青年基金項目和面上項目各1項，東北林業大學引進人才項目1項，中央高校項目1項，黑龍江省項目2項，各類項目到賬經費總額200餘萬元。
學術兼職
JDSIS期刊編輯，Frontiers集團雜誌的Guest Editor，主持專刊一份，Nature chemical biology等期刊審稿人
中國自動化學會委員
中國人工智慧學會委員
中國計算機學會會員
發明專利
一種RNA測序數據的基因表達量計算方法。專利號：ZL 2020 1 0603775.3
論文發表
Chen, B., Wang, M., Guo, Y., Zhang, Z., Zhou, W., Cao, L., Zhang, T., Ali, S., Xie, L., Li, Y., Zinta, G.,Sun, S., & Zhang, Q. Climate-related naturally occurring epimutation and their roles in plant adaptation in A. thaliana. Molecular Ecology 2024;00:e17356.（共同通訊作者；中科院生物學1區、TOP期刊，影響因子7.7）
Zhao Y, Gui L, Hou C, Zhang D, andSun S* (2024) GwasWA: A GWAS one-stop analysis platform from WGS data to variant effect assessment. Computers in Biology and Medicine. 169:107820. (影響因子7.7，中科院二區，Top期刊)
Sun S, Ye X*, and Zou Q* (2023) Editorial: Machine learning on understanding the epigenetic mechanisms underlying plant adaptation and domestication. Front. Plant Sci. 14:1236787. (影響因子：5.6，中科院二區，Top期刊)
Chen B, Guo Y, Zhang X, Wang L, Cao L, Zhang T, Zhang Z, Zhou W, Xie L, Wang J,Sun S* (共同通訊), Yang C*, and Zhang Q* (2022) Climate-responsive DNA methylation is involved in the biosynthesis of lignin in birch. Front. Plant Sci. 13:1090967. (影響因子：5.6，中科院二區，Top期刊)
Wang X,Sun S(共同第一作者), Sedio B, Glomglieng S, Cao M, Cao K, Yang J, Zhang J*, and Yang J* (2022). Niche differentiation along multiple functional-trait dimensions contributes to high local diversity of Euphorbiaceae in a tropical tree assemblage. Journal of Ecology, 110, 2731–2744. (影響因子：6.381，中科院一區，Top期刊)
Ding K,Sun S(共同第一作者), Luo Y, Long C, Zhai J, Zhai Y, and Wang G* (2023) PlantCADB: A Comprehensive Plant Chromatin Accessibility Database. Genomics, Proteomics & Bioinformatics, 21, 311-323. (影響因子：9.5，中科院一區，Top期刊)
Sun S, Dong B*, and Zou Q*. Revisiting genome-wide association studies from statistical modelling to machine learning. Briefings in Bioinformatics. 22 (4), bbaa263. (影響因子：8.990，中科院一區，Top期刊)
Sun S, Xu L*, Zou Q*, and Wang G*. BP4RNAseq: a babysitter package for retrospective and newly generated RNA-seq data analyses using both alignment-based and alignment-free quantification method. Bioinformatics. 37 (9), 1319–1321. (影響因子：5.610，中科院一區，Top期刊)
Sun S*, Jung E, Gaviria J, and Engelbrecht B M J. Drought survival is positively associated with high turgor loss point in temperate perennial grassland species. Functional Ecology, 2020, 34:788-798. (影響因子：4.43，中科院一區，Top期刊)
Sun S, Ding H, Wang D*, and Han S*. Identifying antifreeze proteins based on key evolutionary information. Frontiers in Bioengineering and Biotechnology, 2020, 8:1-8. (影響因子：3.644，中科院二區)
Sun S, Wang C, Ding H, and Zou Q*. Machine learning and its applications in plant molecular studies. Briefings in functional genomics, 2020, 19:40-48. (影響因子：2.941，中科院二區)
Sun S, Ao C, Wang D*, and Dong B*. The frequencies of oppositely charged, uncharged polar, and β-branched amino acids determine proteins' thermostability. IEEE Access, 2020, 8:66839-66845. (影響因子：3.745，中科院二區，Top期刊)
Jung E, Gaviria J,Sun S, and Engelbrecht B M J*. Comparative drought resistance of temperate grassland species: testing performance trade-offs and the relation to distribution. Oecologia, 2020:1-14. (影響因子：2.915，中科院二區)
Bartlett M K*, Zhang Y, Yang J, Kreidler N,Sun S, et al. Drought tolerance as a driver of tropical forest assembly: resolving spatial signatures for multiple processes. Ecology, 2016, 97:503-514. (影響因子：4.7，中科院一區，Top期刊)
Bartlett M K*, Zhang Y, Kreidler N,Sun S, et al. Global analysis of plasticity in turgor loss point, a key drought tolerance trait. Ecology Letters, 2014, 17:1580-1590. (影響因子：8.665，中科院一區，Top期刊)
Bartlett M K*, Scoffoni C, Ardy R, Zhang Y,Sun S, et al. Rapid determination of comparative drought tolerance traits: using an osmometer to predict turgor loss point. Methods in Ecology and Evolution, 2012, 3:880-888. (影響因子：6.51，中科院一區，Top期刊)
