1. Lei Qin, Jianying Li, Qiongqiong Wang, Zhongping Xu, Lin Sun, Muna Alariqi, Hakim Manghwar, Guanyin Wang, Bo Li, Xiao Ding, Hangping Rui, Huimei Huang, Tianliang Lu , Keith Lindsey，Henry Daniell, Xianlong Zhang, Shuangxia Jin*.High Efficient and Precise Base Editing of C·G to T·A in the Allotetraploid Cotton (Gossypium hirsutum) Genome Using a Modified CRISPR/Cas9 System.Plant Biotechnology Journal, 2019, （*通訊作者）(SCI IF:6.3)
2. Bo Li Hangping Rui Yajun Li Qiongqiong Wang Muna Alariqi Lei Qin Lin Sun Xiao Ding Fuqiu Wang Jiawei Zou Yanqing Wang Daojun Yuan Xianlong Zhang Shuangxia Jin * . Robust CRISPR/Cpf1(Cas12a) mediated genome editing in allotetraploid cotton (G.hirsutum). Plant Biotechnology Journal, 2019,（*通訊作者）(SCI IF:6.3)
3.Maojun Wang, Lili Tu, Daojun Yuan, De Zhu, Chao Shen, Jianying Li, Fuyan Liu, Liuling Pei, Pengcheng Wang, Guannan Zhao, Zhengxiu Ye, Hui Huang, Feilin Yan, Yizan Ma, Lin Zhang, Min Liu, Jiaqi You, Yicheng Yang, Zhenping Liu, Fan Huang, Baoqi Li, Ping Qiu, Qinghua Zhang, Longfu Zhu, Shuangxia Jin, Xiyan Yang, Ling Min, Guoliang Li, Ling-Ling Chen, Hongkun Zheng, Keith Lindsey, Zhongxu Lin, Joshua A. Udall & Xianlong Zhang.Reference genome sequences of two cultivated allotetraploid cottons, Gossypium hirsutum and Gossypium barbadense. 2018, Nature Genetics
4.Li,Jianying;Manghwar,Hakim;Sun,Lin;Wang,Pengcheng;Wang,Guanying;Sheng, Hanyan;Zhang,Jie;Liu,Hao;Qin,Lei;Rui,Hangping;Li,Bo;Lindsey,Keith;Daniell,Henry; Jin, Shuangxia*;Zhang,Xianlong.Whole genome sequencing reveals rare off-target mutations and considerablein herentgeneticor/ and somaclonal variations in CRISPR-Cas9-editedcottonplants. 2018, Plant Biotechnology Journal, 17, 858-868 （*通訊作者） (SCI IF:6.3)
5.Hu Q, Min L, Yang X, Jin S, Zhang L, Li Y, Ma Y, Qi X, Li D, Liu H, Lindsey K, Zhu L, Zhang X. Laccase GhLac1 modulates broad-spectrum biotic stress tolerance via DAMP-triggered immunity. Plant Physiology, 2018, 176(2):1808-1823 （(SCI IF:5.95）
6.Jianying Li, Maojun Wang, Yajun Li, Qinghua Zhang, Keith Lindsey, Henry Daniell,Shuangxia Jin*, Xianlong Zhang. Multi-omics analyses reveal epigenomics basis for cotton somatic embryogenesis through successive regeneration acclimation (SRA) process, 2018,Plant Biotechnology Journal, 17，435-450（*通訊作者） (SCI IF:6.3)
7.Luo, Jing; Liang, Sijia; Li, Jianying; Xu, Zhongping; Li, Lun; Zhu, Bangqin; Li, Zhe; Lei, Chaoliang; Lindsey, Keith; Chen, Lizhen*; Jin, Shuangxia*; Zhang, Xianlong. A transgenic strategy for controlling plant bugs (Adelphocoris suturalis) through expression of double- stranded RNA (dsRNA) homologous to Fatty acyl-CoA reductase (FAR) in cotton. New Phytologist, 2017（*通訊作者） (SCI IF: 7.2)
8.Lin Sun, Muna Alariqi, YiZhu, Jianying Li, Zelin Li, Qing Wang, Yajun Li, Hangping Rui, Xianlong Zhang,Shuangxia Jin*. Red fluorescent protein (DsRed2), an ideal reporter for cotton genetic transformation and molecular b reeding,Crop Journal, 2018, 6(4): 366-376（*通訊作者） (SCI IF:2.6) 9.Wang, Pengcheng; Zhang, Jun; Sun, Lin; Ma, Yizan; Xu, Jiao; Liang, Sijia; Deng, Jinwu; Tan, Jiafu; Zhang, Qing; Tu, Lili; Daniell, Henry; Jin, Shuangxia*; Zhang, Xianlong*. High efficient multi-sites genome editing in allotetraploid cotton (Gossypium hirsutum) using CRISPR/Cas9 system,Plant Biotechnology Journal, 2017,（*通訊作者） (SCI IF: 6.3)
10.Maojun Wang, Lili Tu, Min Lin, Zhongxu Lin, Pengcheng Wang, Qingyong Yang, Zhengxiu Ye, Chao Shen, Jianying Li, Lin Zhang, Xiaolin Zhou, Xinhui Nie, Zhonghua Li, Kai Guo, Yizan Ma, Cong Huang, Shuangxia Jin, Longfu Zhu, Xiyan Yang, Ling Min, Daojun Yuan, Qinghua Zhang, Keith Lindsey & Xianlong Zhang,2017, Asymmetric subgenome selection and cis-regulatory divergence during cotton domestication，Nature Genetics, 49(4):579-587
11. Jianying Li#, Lizhen Zhu#, Joe Hull, Sijia Liang, Henry Daniell, Shuangxia Jin*, Xianlong Zhang. Transcriptome analysis reveals a comprehensive insect resistance response mechanism in cotton to infestation by the phloem feeding insect Bemisia tabaci (whitefly). Plant Biotechnology Journal, 2016. (SCI, IF:6.3）(通訊作者）
12.Zhongping Xu , Jingwen Li , Xiaoping Guo , Shuangxia Jin*, Xianlong Zhang*.Metabolic engineering of cottonseed oil biosynthesis pathway via RNA interference.Scientific Reports, 2016, （*通訊作者）(SCI IF: 5.2)
13.Shuangxia Jin and Henry Daniell.The Engineered Chloroplast Genome Just Got Smarter. Trends in Plant Science, 2015, 20(10):622-640 （SCI,IF:12.93)
14.Geng Tian, Linlin Cheng, Xuewei Qi, Zonghe Ge, Changying Niu, Xianlong Zhang, Shuangxia Jin* Transgenic Cotton Plants Expressing Double-stranded RNAs Target HMG-CoA Reductase (HMGR) Gene Inhibits the Growth, Development and Survival of Cotton Bollworms. Int. J. Biol. Sci. 2015; 11(11):1296-1305.(SCI, IF:4.5)（通訊作者）
15.Jin Shuanxia,Singh, Dolendro,Li Lebin,Zhang, Xianlong and Daniell, Henry. Engineered chloroplast dsRNA silences cytochrome p450 monooxygenase, V-ATPase and chitin synthases genes in the insect gut and disrupts Helicoverpa armigera larval development and pupation. Plant Biotechnology Journal, 2015,13 (3), 435-446.(SCI, IF:6.3)
16.Shuangxia Jin and Henry Daniell.Expression of γ-tocopherol methyltransferase in chloroplasts results in massive proliferation of the inner envelope membrane and decreases susceptibility to salt and metal-induced oxidative stress by reducing reactive oxygen species. Plant Biotechnology Journal, 2014 (12),1274-1285 . (SCI, IF:6.3)
17. Shuangxia Jin, Xianlong Zhang1, Henry Daniell. Pinellia ternata agglutinin expression in chloroplasts confers broad spectrum resistance against aphid, whitefly, lepidopteran insects, bacterial and viral pathogens.Plant Biotechnology Journal 2012,10(3):313-327 (Cover Story, IF 6.3).
18.Shuangxia Jin, Anderson Kanagaraj, Dheeraj Verma, Theo Lange, Henry Daniell.Release of Hormones from Conjugates: Chloroplast Expression of ß-glucosidase Results in Elevated Phytohormone Levels Associated with Significant Increase in Biomass and Protection from Aphids or Whiteflies Conferred by Sucrose Esters. Plant Physiology,2011,155,222-235.(SCI，IF:6.5)
