葉從庭，男，博士，廈門大學環境與生態學院助理教授。
基本介紹
- 中文名：葉從庭
- 畢業院校：廈門大學
- 學位/學歷：博士
- 專業方向：生物大數據分析與挖掘
- 任職院校：廈門大學
個人經歷,研究方向,主講課程,學術成果,
個人經歷
武漢科技大學 工學學士(2005-2009)
廈門大學 工學博士(2009-2015)
美國邁阿密大學 訪問學者(2013-2014)
廈門大學 研究型助理教授(師資博士後)(2016-2019)
廈門大學 助理教授(2019-現在)
B.S., Wuhan University of Science and Technology (2005-2009)
Ph.D., Xiamen University (2009-2015)
Visiting Scholar, Miami University (2013-2014)
Research Assistant Professor, Xiamen University (2016–2019)
Assistant Professor, Xiamen University （2019-present）
研究方向
生物大數據分析與挖掘、生物信息算法及工具、組學數據處理與分析
Mining and Analysis of Biology Data, Development of Bioinformatics Algorithms and Tools, Genomics and Transcriptomics Data Processing and Analysis
主講課程
生物信息學(Bioinformatics)
學術成果
代表性論文
[01] Congting Ye*#, Qian Zhou#, Yiling Hong, Qingshun Q. Li. (2019) Role of alternative polyadenylation dynamics in acute myeloid leukemia at single-cell resolution. RNA Biology.
[02] Qian Zhou, Haihui Fu, Dewei Yang, Congting Ye, Sheng Zhu, Juncheng Lin, Wenbin Ye, Guoli Ji, Xinfu Ye, Xiaohui Wu and Qingshun Quinn Li (2019). Differential alternative polyadenylation contributes to the developmental divergence between two rice subspecies, japonica and indica. Plant Journal,
[03] Congting Ye, Yuqi Long, Guoli Ji, Qingshun Q. Li, Xiaohui Wu. (2018) APAtrap: identification and quantification of alternative polyadenylation sites from RNA-seq data. Bioinformatics, .
[04] Liwei Hong, Congting Ye, Juncheng Lin, Haihui Fu, Xiaohui Wu, Qingshun Q. Li. (2018) Alternative polyadenylation is involved in auxin-based plant growth and development. Plant Journal,
[05] Jinting Guan, Moliang Chen, Congting Ye, James J. Cai, Guoli Ji. (2017) AEGS: identifying aberrantly expressed gene sets for differential variability analysis. Bioinformatics,
[06] Congting Ye, Guoli Ji, Chun Liang. (2016) detectMITE: A novel approach to detect miniature inverted repeat transposable elements in genomes. Scientific Reports,
[07] Lei Li, Guoli Ji, Congting Ye, Changlong Shu, Jie Zhang, Chun Liang. (2015) PlantOrDB: a genome-wide ortholog database for land plants and green algae. BMC Plant Biology, 15(1):
[08] Congting Ye, Guoli Ji, Lei Li, Chun Liang. (2014) detectIR: a novel program for detecting perfect and imperfect inverted repeats using complex numbers and vector calculation. PLoS ONE,
[09] Hanjie Li#, Congting Ye#, Guoli Ji, Xiaohui Wu, Zhe Xiang, Yuanyue Li, Yonghao Cao, Xiaolong Liu, Daniel C. Douek, David A. Price, Jiahuai Han. (2012) Recombinatorial Biases and Convergent Recombination Determine Interindividual TCR beta Sharing in Murine Thymocytes. Journal of Immunology, 189(5): (co-first author)
[10] Hanjie Li, Congting Ye, Guoli Ji, Jiahuai Han. (2012) Determinants of public T cell responses. Cell Research, 22(1):
科研課題
國家自然科學基金青年項目, 基於單細胞轉錄組數據的APA位點建模與動態調控研究 , 2019/01-2021/12, 25萬元, 主持.
國家自然科學基金面上項目, 集成單細胞轉錄組數據的選擇性多聚腺苷化網路建模研究 2019/01-2022/12, 63萬元, 參與.
國家自然科學基金青年項目, 水稻mRNA選擇性多聚腺苷化在高溫乾旱脅迫中調控作用研究 2019/01-2021/12, 25萬元, 參與.
廈門大學校長基金, 基於向量計算的重複序列識別算法研究 ， 2017/01-2019/12, 30萬元, 主持.
國家自然科學基金面上項目, 海洋青鱂魚基因組結構及其對鹽度適應的分子機理的研究, 2017/01-2020/12, 60萬元, 參與.
國家自然科學基金面上項目, 全基因組水平植物信使RNA選擇性多聚腺苷化調控研究 , 2012/01-2015/12, 50萬元, 參與.
基礎創新科研基金, 植物選擇性多聚腺苷化位點預測及其網路平台構建, 2011/06-2013/06, 10萬元, 主持.
